Before you start
- Bring blood, PBS and gradient medium to room temperature (18–20 °C); cold medium gives poor separation.
- Process blood within a few hours of collection (EDTA or heparin tubes).
Reagents and materials
Totals are for 10 mL of blood (+10% extra). Per-mL of blood amounts are in the middle column.
| Reagent | Per mL of blood | Total |
|---|---|---|
| PBS, room temperature (dilution) | 1 mL | 1 mL |
| Density-gradient medium (1.077 g/mL), room temperature | 1 mL | 1 mL |
| PBS + 2% FBS (washes) | 3 mL | 3 mL |
| 0.4% trypan bluefor counting | 1 µL | 1 µL |
Equipment
- Biosafety cabinet (class II)
- 15/50 mL conical tubes
- Sterile transfer pipettes
- Centrifuge with swing-out rotor and brake control
Procedure
Tick steps as you go (saved in this browser). Steps with a clock have a built-in timer.
Dilute the blood
Dilute blood 1:1 with room-temperature PBS and mix gently.
Layer onto the gradient
Add gradient medium to a tube (for example 15 mL in a 50 mL tube) and slowly layer the diluted blood on top (up to ~30 mL) without mixing the interface.
Centrifuge with the brake off
Spin at 400 × g for 30–40 min at room temperature with acceleration low and the brake off.
Collect the mononuclear layer
Remove most of the plasma, then collect the cloudy PBMC band at the interface with a pipette into a new tube.
First wash
Fill the tube with PBS + 2% FBS and centrifuge at 300 × g for 10 min.
Second wash (removes platelets)
Resuspend and centrifuge at 200 × g for 10 min; discard the platelet-rich supernatant.
Count
Resuspend and count with trypan blue. Typical yield is roughly 1–2 × 10⁶ PBMC per mL of healthy-donor blood.
Critical points
- Temperature matters: everything at 18–20 °C.
- Brake off, or the interface mixes.
- Granulocyte contamination increases if blood is old (more than ~24 h).
Troubleshooting
| Problem | What to check or change |
|---|---|
| No clear band | Check reagents are at room temperature and the brake was off; dilute blood more for high haematocrit. |
| Red cells in PBMC | Short ACK lysis (1–2 min) or repeat the 200 × g wash. |
| Low viability after freezing | Freeze in 90% FBS + 10% DMSO at a controlled rate; see the cryopreservation protocol. |
Safety
Human blood is potentially infectious: BSL-2 practices, class II cabinet, sealed centrifuge buckets and institutional approval for human samples.
Further reading
- Manufacturer instructions for the gradient medium (Ficoll-Paque PLUS, Lymphoprep).
This is a general starting-point protocol written for SolvesEverything. Follow your institution’s approved protocols, safety rules and manufacturers’ instructions, and optimise for your system. Spotted an error? Tell us.