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Microbiology

Viable counts (CFU) by serial dilution and plating

Make 10-fold serial dilutions, plate them and count colonies to calculate colony-forming units per mL.

Total time45 min + overnight
Hands-on45 min
LevelBasic
Steps5
0 of 5 steps done

Before you start

  • Label tubes 10⁻¹ to 10⁻⁶ and plates with sample and dilution.

Reagents and materials

Totals are for 3 samples (+10% extra). Per-sample amounts are in the middle column.

ReagentPer sampleTotal
Sterile diluent (PBS or saline) for six 10-fold dilutions900 µL per tube5.4 mL5.4 mL
Agar plates4 each4 each
Sample100 µL100 µL

Buffers and recipes

Calculation per sample

Countable plates30–300 colonies (spread plates)
CFU/mLcolonies ÷ (dilution × volume plated in mL)
Example150 colonies from 100 µL of the 10⁻⁵ dilution → 150 ÷ (10⁻⁵ × 0.1) = 1.5 × 10⁸ CFU/mL

Equipment

  • Sterile tubes
  • Spreader or glass beads
  • Incubator

Procedure

Tick steps as you go (saved in this browser). Steps with a clock have a built-in timer.

  1. Prepare tubes

    Add 900 µL diluent to each tube.

  2. Dilute

    Transfer 100 µL sample into the first tube, vortex, change tip, and repeat down the series.

  3. Plate

    Spread 100 µL of the appropriate dilutions on plates (duplicate), or spot 10 µL drops for a quick estimate.

  4. Incubate

    Incubate inverted at the right temperature until colonies are countable (often 16–24 h).

  5. Count

    Count plates with 30–300 colonies and calculate CFU/mL.

Critical points

  • Change tips at each dilution and mix well — the most common sources of error.

Troubleshooting

ProblemWhat to check or change
All plates too many or too fewAdjust the dilution range.
Spreading coloniesUse drier plates; plate smaller volumes.

Safety

Work at the organism’s biosafety level; decontaminate plates before disposal.

Further reading

  • ASM Microbe Library: serial dilution and plate count protocols.

This is a general starting-point protocol written for SolvesEverything. Follow your institution’s approved protocols, safety rules and manufacturers’ instructions, and optimise for your system. Spotted an error? Tell us.