Before you start
- Pre-warm selective plates to room temperature/37 °C and set the water bath to exactly 42 °C.
Reagents and materials
Totals are for 4 transformations (+10% extra). Per-transformation amounts are in the middle column.
| Reagent | Per transformation | Total |
|---|---|---|
| Chemically competent cells | 50 µL | 50 µL |
| Plasmid DNA (1–100 ng) or ligation (≤ 10% of cell volume) | 2 µL | 2 µL |
| SOC medium | 250 µL | 250 µL |
| Selective LB agar plate | 1 each | 1 each |
Buffers and recipes
SOC medium per 1 L
| Tryptone | 20 g |
| Yeast extract | 5 g |
| NaCl | 0.584 g (10 mM) |
| KCl | 0.186 g (2.5 mM) |
| After autoclaving: 1 M MgCl₂ + 1 M MgSO₄ (10 mM each) | 10 mL each |
| After autoclaving: 1 M glucose, filter-sterilised (20 mM) | 20 mL |
SOB is SOC without glucose.
Equipment
- 42 °C water bath
- Ice
- 37 °C shaking incubator
- Spreader or glass beads
Procedure
Tick steps as you go (saved in this browser). Steps with a clock have a built-in timer.
Thaw cells on ice
Thaw competent cells on ice (about 10 min). Do not warm by hand.
Add DNA
Add DNA, flick gently to mix (no pipetting up and down) and keep on ice for 30 min.
Heat shock
Place tubes at 42 °C for 30–45 s exactly (per the cells’ instructions).
Back on ice
Return to ice for 2 min.
Recover
Add 250–950 µL SOC and shake at 37 °C for 1 h.
Plate
Spread 50–200 µL on selective plates (for ligations, also plate a concentrated pellet).
Incubate
Incubate inverted at 37 °C overnight (16–18 h).
Critical points
- Controls: uncut vector (efficiency), no DNA (contamination/antibiotic check) and vector-only ligation (background).
- Recovery can be shortened for ampicillin selection, but is needed for kanamycin and others.
Troubleshooting
| Problem | What to check or change |
|---|---|
| No colonies | Check competent-cell efficiency with a control plasmid, antibiotic choice and concentration, heat-shock timing. |
| Lawn or many satellites | Old ampicillin plates or too long incubation; use fresh plates or carbenicillin. |
Safety
BSL-1 for lab E. coli strains; decontaminate cultures before disposal.
Further reading
- Green MR, Sambrook J. Molecular Cloning (4th edition): transformation of E. coli.
This is a general starting-point protocol written for SolvesEverything. Follow your institution’s approved protocols, safety rules and manufacturers’ instructions, and optimise for your system. Spotted an error? Tell us.